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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816622.1_cds_XP_016498889.1_12866
CDS Infomation

[gene=LOC107817549] [db_xref=GeneID:107817549] [protein=beta-glucosidase BoGH3B-like] [protein_id=XP_016498889.1] [location=complement(join(29133..29602,30213..30414,30832..31014,31101..31205,31736..31979,32407..32552,33112..33202,33527..33731,33810..33960))] [gbkey=CDS]
Sequence

ATGGATTGTGTTTACAAAGATCCTAATGCACCAGTTGAAGAAAGAGTCAAAGATCTTTTA
TCAAGAATGACACTTGAAGAAAAGATTGGTCAAATGACCCAGATCGAACGAGCTGTTGCT
AATCATTCTGCAATAAGAGATGGTTGCATTGGGAGTGTATTGAGTGGAGGTGGGAGTAGA
CCATTTGAGAATGCAGAGTCAAGTGATTGGGCTAACATGATTGATGAGTTTCAAAAAGGT
GCAGTTGAGACCAGGCTTGGCATTCCCATTTTCTATGGGACAGATGCTATTCATGGGAAT
AATAATGTTTGGGGTGCCACTATTTTTCCTCACAACATTGGACTTGGAGCCACCAGAGAT
GCTGATTTAGTCACAAGGATAGGAGTTGTGACAGCTCTTGAAACCAGGGCATGTGGAGCT
CAATATGCTTTTGCTCCTTGTGTTGCTGTCGTCAAAGACCCTAGATGGGGAAGATTTTAC
GAGAGTTACAGTGAAGATACTGAAGTTGTCAGAAAAATGACCTCTCTTGTTACGGGATTG
CAAGGTCAGCCACCAGAAGGACATCCAAATGGCTATCCTTATGTTGCTGGAAGAAATTAT
GTCATGGCATCTGCAAAGCATTTCGTAGGTGATGGGGCAACTGAGAATGGTACAAACGAA
GGAAATACAATAGCATCGCATGATGAAATGTTCAATATCCACCTAGCACCATATATAGAC
TGTATCGCCCGAGGAGTTTGCACTGTTATGGCATCCTACTCCAGCTGGAATGGAGACAAA
ATGCACACTCATCGTTATCTTTTGACAGAGGTCTTGAAAGATAAGCTTGGATTCAAGGGT
CTCGTGATTACAGACTGGGAAGCACTTGACCGGCTTACTGACCCTCATGGATCAGATTAT
CGTCAATCAATCAAGTCAACCATCAATGCTGGAATTGATATGGTGATGGTGCCATTTAGA
TATGAATTATTCTTAGAGGAGCTGTTATCACTGGTCAAATCTGGGGAGATATCGATGGCC
AGGATAGATGATGCTGTTGAAAGAATCTTGAGAGTCAAATTTGTTACTGGATTATTTGAA
CATCCATTTACAGATAGATCATTGATAGAATTGGTTGGTTGTGAGGCACATAGAGATGTA
GCACGTGAAGCCGTTCGTAAATCCTTAGTCTTGTTGAAAAACGGGAAAGATACAAAGAAA
CCATTTCTTCCTCTAGATAGGAATGCCAAAAAGATCCTCGTTGCTGGAACTCATGCTGAT
GATCTTGGTTACCAGTGTGGAGGGTGGACTGCTACATGGACAGGACAAAGTGGCAGAATC
ACAGTTGGCACAACCATATTGGAAGCGTTAAGGAAAGTGATAGGAAAGGAAACAGAGATA
GTATTTGAGCCAAATCCTACACCAGAAACTTTTGCTAATCAAGACTTCTCGTTTGCCATC
GTGGCCATTGGTGAGGGTCCATATTGTGAAACTGGTGGTGACGATCCAGAGTTAAAAATT
CCATTTAATGGAACAGAAATTGCAACCTTTGTTGCTGACAGAGTTCCTACAGTGACGATT
CTGATTTCTGGAAGACCTATGGTATTAGAACCATCGCTCTTGGAAAAAGTAGATGCATTT
GTTGCAGCTTGGTTGCCCGGAACTGAAGGAACAGGAATCACAGATGTCCTTTTTGGAGAT
TATCCATTTCAAGGGAAACTACCTGTGACATGGTTTAAAACTGTTGATCAATTGCCAATG
CACGTTCGAGGGAATTCCGATCATCTATTTCCTTTCGGATTTGGTCTGACAGCCTAA

Peptide Sequence

PEP ID

XP_016498889.1
PEP Infomation

PREDICTED: beta-glucosidase BoGH3B-like [Nicotiana tabacum]
Sequence

MDCVYKDPNAPVEERVKDLLSRMTLEEKIGQMTQIERAVANHSAIRDGCIGSVLSGGGSR
PFENAESSDWANMIDEFQKGAVETRLGIPIFYGTDAIHGNNNVWGATIFPHNIGLGATRD
ADLVTRIGVVTALETRACGAQYAFAPCVAVVKDPRWGRFYESYSEDTEVVRKMTSLVTGL
QGQPPEGHPNGYPYVAGRNYVMASAKHFVGDGATENGTNEGNTIASHDEMFNIHLAPYID
CIARGVCTVMASYSSWNGDKMHTHRYLLTEVLKDKLGFKGLVITDWEALDRLTDPHGSDY
RQSIKSTINAGIDMVMVPFRYELFLEELLSLVKSGEISMARIDDAVERILRVKFVTGLFE
HPFTDRSLIELVGCEAHRDVAREAVRKSLVLLKNGKDTKKPFLPLDRNAKKILVAGTHAD
DLGYQCGGWTATWTGQSGRITVGTTILEALRKVIGKETEIVFEPNPTPETFANQDFSFAI
VAIGEGPYCETGGDDPELKIPFNGTEIATFVADRVPTVTILISGRPMVLEPSLLEKVDAF
VAAWLPGTEGTGITDVLFGDYPFQGKLPVTWFKTVDQLPMHVRGNSDHLFPFGFGLTA

Transcript Sequence

Gene sequence data has not been registered.